BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D06SP1|AL425114
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1332 1968 0.0
>3x_Contig1332
Length = 6394
Score = 1968 bits (992), Expect = 0.0
Identities = 1002/1004 (99%), Gaps = 1/1004 (0%)
Strand = Plus / Minus
Query: 1 atcctgttgctgttttgtatccagtacggtccaatgattccagtgcaagttctagtcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5800 atcctgttgctgttttgtatccagtacggtccaatgattccagtgcaagttctagtcgga 5741
Query: 61 aaagcggctctgatgctcgaaacatggatgatacgataaaggacatcaaaccgaataatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5740 aaagcggctctgatgctcgaaacatggatgatacgataaaggacatcaaaccgaataatc 5681
Query: 121 ctgcaagcaaccctgtctgtaagaactgttatacgtcaactacaccgctctggcgtaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5680 ctgcaagcaaccctgtctgtaagaactgttatacgtcaactacaccgctctggcgtaggg 5621
Query: 181 atgagcatgggtctgtcttgtgtaatgcatgtggtctatttttgaagttgcacgggagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5620 atgagcatgggtctgtcttgtgtaatgcatgtggtctatttttgaagttgcacgggagac 5561
Query: 241 caagacctatcagtttgaagactgacgttatcaaatcccgtaatcggaagtcatctcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5560 caagacctatcagtttgaagactgacgttatcaaatcccgtaatcggaagtcatctcatc 5501
Query: 301 acgatagtccgaacgacaagaagaggaaagaccccgctttgctaacaccgaacagttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5500 acgatagtccgaacgacaagaagaggaaagaccccgctttgctaacaccgaacagttcta 5441
Query: 361 caaagaagaaaaaaaacaatgcttacaatatgaataatgacattgttacacagaatgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5440 caaagaagaaaaaaaacaatgcttacaatatgaataatgacattgttacacagaatgaca 5381
Query: 421 atgcacatcaaaaccaccaagctcagacttctcagcaatttccgcagccattaacacccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5380 atgcacatcaaaaccaccaagctcagacttctcagcaatttccgcagccattaacacccc 5321
Query: 481 aggtcagttggcaaagtcaaaatgttgagctctctgaggatatgaagttccataaaatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5320 aggtcagttggcaaagtcaaaatgttgagctctctgaggatatgaagttccataaaatcc 5261
Query: 541 tgccaaagaataaccagggcaaaggcaacccactgccacatctatccaacattctgtccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5260 tgccaaagaataaccagggcaaaggcaacccactgccacatctatccaacattctgtccg 5201
Query: 601 tttctagcgctactcccatgacaggtgacttcccaactccaaattcccctagattatcac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5200 tttctagcgctactcccatgacaggtgacttcccaactccaaattcccctagattatcac 5141
Query: 661 atttacacagaccaccgccacatctagccaccatcaatgagatcttatcgaatagcaacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5140 atttacacagaccaccgccacatctagccaccatcaatgagatcttatcgaatagcaacg 5081
Query: 721 ctcaacatatgtctcagacttcacctccggcgcagtttagtcaatcaacagttgggaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5080 ctcaacatatgtctcagacttcacctccggcgcagtttagtcaatcaacagttgggaaac 5021
Query: 781 cattagacaattcgagctctaatcatcagcaacaacaaggcactcaacttccaagcatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5020 cattagacaattcgagctctaatcatcagcaacaacaaggcactcaacttccaagcatca 4961
Query: 841 tgagttaccattctcaacagtcattacaaaacactgccgtactacctcctgctcagctgc 900
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4960 tgagtaaccattctcaacagtcattacaaaacactgccgtactacctcctgctcagctgc 4901
Query: 901 cgctgcaacagcaaccacaacctcaactatctcaaccattactgatgcaacaggaaagta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4900 cgctgcaacagcaaccacaacctcaactatctcaaccattactgatgcaacaggaaagta 4841
Query: 961 aatcttcatatttttctacgtctcct-ccccgctagaactgcag 1003
|||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4840 aatcttcatatttttctacgtctcctcccccgctagaactgcag 4797
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6912
Number of Sequences: 1807
Number of extensions: 6912
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)